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  5. Cre01.g019250

Cre01.g019250 (GME)


Aliases : GME

Description : Redox homeostasis.low-molecular-weight scavengers.ascorbate biosynthesis.GDP-D-mannose-epimerase (GME)


Gene families : OG0002260 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002260_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g019250
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Als_g36259 GME not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0104.g044834 GME EC_5.1 racemase or epimerase & original description: CDS=141-1298 0.02 OrthoFinder output from all 47 species
Cba_g31870 GME EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36486 GME EC_5.1 racemase or epimerase & original description: none 0.01 OrthoFinder output from all 47 species
Len_g35322 GME EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18967 GME EC_5.1 racemase or epimerase & original description: none 0.01 OrthoFinder output from all 47 species
Solyc09g082990.3.1 GME, Solyc09g082990 GDP-D-mannose-epimerase (GME) 0.02 OrthoFinder output from all 47 species
Zm00001e021256_P001 GME, Zm00001e021256 GDP-D-mannose-epimerase (GME) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0050662 obsolete coenzyme binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 32 266
No external refs found!