1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre01.g018200

Cre01.g018200


Description : RNA biosynthesis.transcriptional activation.PHD finger transcription factor


Gene families : OG0002837 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002837_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g018200

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00140p00029580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
AT2G27980 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 OrthoFinder output from all 47 species
AT2G36720 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 OrthoFinder output from all 47 species
Aev_g48839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60436.t1 Aspi01Gene60436 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene66264.t1 Aspi01Gene66264 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.36G048800.1 Ceric.36G048800 not classified & original description: pacid=50568689... 0.06 OrthoFinder output from all 47 species
Ceric.36G053700.1 Ceric.36G053700 not classified & original description: pacid=50569216... 0.03 OrthoFinder output from all 47 species
Dcu_g12142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031451001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
GSVIVT01033711001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
LOC_Os06g01170.1 LOC_Os06g01170 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g08907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03502 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Mp2g04330.1 No alias PHD finger transcription factor 0.05 OrthoFinder output from all 47 species
Nbi_g11568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47833 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0161.g023919 No alias not classified & original description: CDS=862-4203 0.02 OrthoFinder output from all 47 species
Sam_g28171 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g36826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo437662 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc10g083800.2.1 Solyc10g083800 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc10g084650.3.1 Solyc10g084650 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc11g066480.2.1 Solyc11g066480 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
Tin_g14006 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e013368_P001 Zm00001e013368 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 1759 1798
No external refs found!