Cre01.g016800

No description available

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre01.g016800
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
Ala_g06990	PUB23	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g25593	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g08920	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g29544	PUB23	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc11g068940.1.1	PUB24, Solyc11g068940	E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Tin_g06727	PUB26	U-Box-group-III E3 ubiquiTin ligase & original description: none	0.01	OrthoFinder output from all 47 species
Zm00001e015491_P001	PUB23, Zm00001e015491	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	349	416

External Links

No external refs found!