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  5. Cre01.g004350

Cre01.g004350


Description : Vesicle trafficking.endomembrane trafficking.protein recycling.deubiquitination.BRO1 deubiquitinase recruiting protein


Gene families : OG0001827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001827_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g004350

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00214440 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Aev_g04818 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.01 OrthoFinder output from all 47 species
Aop_g02609 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000223 No alias not classified & original description: CDS=1-621 0.02 OrthoFinder output from all 47 species
Cba_g11586 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z055000.1 Ceric.1Z055000 deubiquitinase recruiting protein *(BRO1) & original... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.15 No alias Vacuolar-sorting protein BRO1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ehy_g08527 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01011794001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Len_g19295 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
MA_19866g0010 No alias Vacuolar-sorting protein BRO1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g25705 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.01 OrthoFinder output from all 47 species
Sam_g14255 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
Solyc04g007560.3.1 Solyc04g007560 deubiquitinase recruiting protein (BRO1) 0.02 OrthoFinder output from all 47 species
Solyc05g008430.4.1 Solyc05g008430 deubiquitinase recruiting protein (BRO1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR025304 ALIX_V_dom 421 706
IPR004328 BRO1_dom 8 383
No external refs found!