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  5. GSVIVT01038796001

GSVIVT01038796001


No description available


Gene families : OG0000572 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000572_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01038796001
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT2G18360 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G36610 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G09430 No alias alpha/beta-Hydrolases superfamily protein 0.12 OrthoFinder output from all 47 species
Als_g35070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25876.t2 Aspi01Gene25876 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0075.g037625 No alias not classified & original description: CDS=84-1271 0.03 OrthoFinder output from all 47 species
Ceric.05G032800.1 Ceric.05G032800 not classified & original description: pacid=50578947... 0.03 OrthoFinder output from all 47 species
Ceric.07G032600.1 Ceric.07G032600 not classified & original description: pacid=50627659... 0.02 OrthoFinder output from all 47 species
Dcu_g40594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_03307 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_34137 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os01g44960.1 LOC_Os01g44960 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os03g08090.2 LOC_Os03g08090 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g08100.1 LOC_Os03g08100 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g27110.1 LOC_Os03g27110 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Len_g06976 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_12747g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_182752g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_478906g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g06240.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g08910.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g21870.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ppi_g07383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo101768 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo118740 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo79445 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc08g061240.3.1 Solyc08g061240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g047340.2.1 Solyc10g047340 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g009000.2.1 Solyc11g009000 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g03203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000573_P001 Zm00001e000573 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e001875_P001 Zm00001e001875 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e010748_P001 Zm00001e010748 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e015594_P002 Zm00001e015594 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e020374_P001 Zm00001e020374 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025866_P002 Zm00001e025866 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e035582_P001 Zm00001e035582 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 52 290
No external refs found!