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  5. GSVIVT01038732001

GSVIVT01038732001 (APUM8, PUM8)


Aliases : APUM8, PUM8

Description : Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: GSVIVT01038732001

Target Alias Description ECC score Gene Family Method Actions
AT1G35750 PUM10, APUM10 pumilio 10 0.03 OrthoFinder output from all 47 species
Ala_g18476 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03238 APUM12, PUM12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009020001 PUM7, APUM7 Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Nbi_g04438 APUM12, PUM12 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 148 169
IPR001313 Pumilio_RNA-bd_rpt 177 209
IPR001313 Pumilio_RNA-bd_rpt 33 62
IPR001313 Pumilio_RNA-bd_rpt 107 137
IPR001313 Pumilio_RNA-bd_rpt 3 26
IPR001313 Pumilio_RNA-bd_rpt 70 102
IPR001313 Pumilio_RNA-bd_rpt 218 238
No external refs found!