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  5. GSVIVT01038602001

GSVIVT01038602001 (PUB13, ATPUB13)


Aliases : PUB13, ATPUB13

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type


Gene families : OG0000782 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000782_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01038602001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00268880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Adi_g010439 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g26187 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02598 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72155.t1 Aspi01Gene72155 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G008100.1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g02914 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g72000.1 LOC_Os01g72000 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Solyc01g068490.4.1 Solyc01g068490 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Solyc03g082690.3.1 Solyc03g082690 E3 ubiquitin ligase (PUB) 0.06 OrthoFinder output from all 47 species
Solyc09g083060.4.1 Solyc09g083060 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e018652_P001 Zm00001e018652 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 528 567
IPR003613 Ubox_domain 261 327
No external refs found!