GSVIVT01038591001

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01038591001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00176640	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00033p00212490	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
AMTR_s00059p00213350	ADOF1, DOF1,...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
AT2G46590	DAG2	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.03	OrthoFinder output from all 47 species
AT5G62940	HCA2, DOF5.6	Dof-type zinc finger DNA-binding family protein	0.04	OrthoFinder output from all 47 species
Adi_g058001	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g13677	CDF2	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g27970	OBP3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g11407	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g24626	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.11G014800.1	Ceric.11G014800	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g10863	DOF2.4, ATDOF2.4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g11850	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g37632	OBP4	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g12722	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g13892	OBP1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g16046	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g16327	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g30636	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01025119001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
LOC_Os01g48290.1	LOC_Os01g48290	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os03g55610.1	ADOF2, DOF2,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os07g32510.1	TMO6, LOC_Os07g32510	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
MA_16692g0010	TMO6	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
MA_459791g0010	TMO6	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
MA_56828g0010	No alias	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
MA_7537g0010	TMO6	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Ore_g05846	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g17212	OBP3	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g41543	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g01905	DOF2.4, ATDOF2.4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g28297	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g28908	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g48794	CDF3	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Pnu_g26540	CDF2	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g09266	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g11469	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012148	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=1-1128	0.03	OrthoFinder output from all 47 species
Sam_g50151	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g077950.3.1	Solyc02g077950	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Solyc02g078620.1.1	ADOF2, DOF2,...	transcription factor (DOF)	0.07	OrthoFinder output from all 47 species
Solyc03g112930.3.1	HCA2, DOF5.6,...	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Solyc03g115940.4.1	CDF3, Solyc03g115940	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc05g054510.2.1	OBP3, Solyc05g054510	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc06g075370.3.1	TMO6, Solyc06g075370	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc06g076030.3.1	Solyc06g076030	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc08g082910.2.1	Solyc08g082910	transcription factor (DOF)	0.07	OrthoFinder output from all 47 species
Solyc09g010680.3.1	Solyc09g010680	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Solyc11g072500.2.1	TMO6, Solyc11g072500	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Spa_g09440	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g01918	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g10128	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g14914	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e000526_P001	CDF3, Zm00001e000526	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e005107_P001	ADOF1, DOF1,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e015414_P004	Zm00001e015414	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e023218_P004	Zm00001e023218	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Zm00001e035074_P001	TMO6, Zm00001e035074	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	32	89

External Links

No external refs found!

GSVIVT01038591001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation