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  5. GSVIVT01038586001

GSVIVT01038586001


Description : Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0007246 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007246_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01038586001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00263380 evm_27.TU.AmTr_v1... Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.05 OrthoFinder output from all 47 species
Adi_g013965 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g00689 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.38G025800.1 Ceric.38G025800 not classified & original description: pacid=50579324... 0.06 OrthoFinder output from all 47 species
Cre09.g404000 No alias Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dcu_g17850 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16670 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g16556 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_09516 No alias Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.1 OrthoFinder output from all 47 species
LOC_Os10g35810.1 LOC_Os10g35810 Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.14 OrthoFinder output from all 47 species
Len_g04136 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp1g10990.1 No alias Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Msp_g00295 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g12697 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g37297 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g37298 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g57312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015268 No alias not classified & original description: CDS=42-668 0.08 OrthoFinder output from all 47 species
Sam_g08902 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc03g082890.3.1 Solyc03g082890 Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.07 OrthoFinder output from all 47 species
Spa_g53789 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Tin_g03066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012591_P001 Zm00001e012591 Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 155 214
No external refs found!