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  5. GSVIVT01038562001

GSVIVT01038562001


Description : RNA biosynthesis.transcriptional activation.NIN-like superfamily.RKD transcription factor


Gene families : OG0000385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01038562001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00218190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NIN-like... 0.01 OrthoFinder output from all 47 species
AMTR_s00057p00091350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NIN-like... 0.01 OrthoFinder output from all 47 species
AT4G35590 No alias RWP-RK domain-containing protein 0.01 OrthoFinder output from all 47 species
AT5G16100 No alias unknown protein; Has 30201 Blast hits to 17322 proteins... 0.01 OrthoFinder output from all 47 species
AT5G66990 No alias RWP-RK domain-containing protein 0.01 OrthoFinder output from all 47 species
Ala_g20283 No alias RKD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06352 No alias germ cell differentiation factor *(RKD) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18030.t1 Aspi01Gene18030 RKD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007535 No alias germ cell differentiation factor *(RKD) & original... 0.03 OrthoFinder output from all 47 species
Ceric.11G040500.1 Ceric.11G040500 germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000405.20 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre03.g149400 No alias RNA biosynthesis.transcriptional activation.NIN-like... 0.01 OrthoFinder output from all 47 species
Dde_g16879 No alias germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species
Ehy_g20482 No alias germ cell differentiation factor *(RKD) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01026649001 No alias RNA biosynthesis.transcriptional activation.NIN-like... 0.03 OrthoFinder output from all 47 species
Len_g30346 No alias RKD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47301 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 151 198
No external refs found!