No description available
Gene families : OG0004448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004448_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00046p00229090 | evm_27.TU.AmTr_v1... | No description available | 0.05 | OrthoFinder output from all 47 species | |
AT5G64420 | No alias | DNA polymerase V family | 0.23 | OrthoFinder output from all 47 species | |
Adi_g057711 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g09041 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g14030 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.13G063900.1 | Ceric.13G063900 | not classified & original description: pacid=50636739... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021108.9 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
Cre01.g012350 | No alias | No description available | 0.11 | OrthoFinder output from all 47 species | |
Dac_g37686 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g37415 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g07139 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g04270.1 | LOC_Os02g04270 | no hits & (original description: none) | 0.14 | OrthoFinder output from all 47 species | |
Len_g46658 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
MA_10433105g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Mp5g07000.1 | No alias | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species | |
Nbi_g01477 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g37557 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pp3c13_11570V3.1 | Pp3c13_11570 | DNA polymerase V family | 0.03 | OrthoFinder output from all 47 species | |
Sam_g30170 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo438609 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g106220.4.1 | Solyc01g106220 | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species | |
Spa_g22551 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g08178 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e013596_P001 | Zm00001e013596 | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005730 | nucleolus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
MF | GO:0008134 | transcription factor binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007015 | DNA_pol_V/MYBBP1A | 170 | 947 |
No external refs found! |