Aliases : VPS2.2
Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS2/CHMP2 component
Gene families : OG0003140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003140_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01037973001 | |
Cluster | HCCA: Cluster_65 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g38221 | VPS2.3 | component *(VPS2/CHMP2) of ESCRT-III complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Als_g11633 | VPS2.3 | component *(VPS2/CHMP2) of ESCRT-III complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene71707.t1 | VPS2.3, Aspi01Gene71707 | component *(VPS2/CHMP2) of ESCRT-III complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g06794 | VPS2.3 | component *(VPS2/CHMP2) of ESCRT-III complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g38407 | VPS2.3 | component *(VPS2/CHMP2) of ESCRT-III complex & original... | 0.09 | OrthoFinder output from all 47 species | |
Lfl_g38742 | VPS2.3 | component *(VPS2/CHMP2) of ESCRT-III complex & original... | 0.04 | OrthoFinder output from all 47 species | |
Pp3c3_2240V3.1 | VPS2.3, Pp3c3_2240 | vacuolar protein sorting-associated protein 2.3 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g30316 | No alias | component *(VPS2/CHMP2) of ESCRT-III complex & original... | 0.14 | OrthoFinder output from all 47 species | |
Smo266789 | VPS2.3 | Vesicle trafficking.endomembrane trafficking.ESCRT... | 0.08 | OrthoFinder output from all 47 species | |
Solyc02g069680.3.1 | VPS2.2, Solyc02g069680 | component VPS2/CHMP2 of ESCRT-III complex | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e012414_P003 | VPS2.2, Zm00001e012414 | component VPS2/CHMP2 of ESCRT-III complex | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0007034 | vacuolar transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005024 | Snf7_fam | 17 | 184 |
No external refs found! |