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  5. GSVIVT01037894001

GSVIVT01037894001 (HAT3.1)


Aliases : HAT3.1

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.PHD transcription factor


Gene families : OG0002217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037894001

Target Alias Description ECC score Gene Family Method Actions
AT3G19510 HAT3.1 Homeodomain-like protein with RING/FYVE/PHD-type zinc... 0.03 OrthoFinder output from all 47 species
Aspi01Gene35959.t1 PRHA, Aspi01Gene35959 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre12.g492200 HAT3.1 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
LOC_Os02g05450.1 PRHA, LOC_Os02g05450 transcription factor (PHD) 0.03 OrthoFinder output from all 47 species
LOC_Os06g12400.1 HAT3.1, LOC_Os06g12400 transcription factor (PHD) 0.03 OrthoFinder output from all 47 species
MA_10427612g0010 HAT3.1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g02060.1 PRHA transcription factor (PHD) 0.05 OrthoFinder output from all 47 species
Ore_g29974 PRHA PHD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029056_P003 HAT3.1, Zm00001e029056 transcription factor (PHD) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 310 365
IPR001356 Homeobox_dom 682 725
No external refs found!