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  5. GSVIVT01037800001

GSVIVT01037800001


Description : Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana


Gene families : OG0008618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008618_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037800001
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT2G04170 No alias TRAF-like family protein 0.04 OrthoFinder output from all 47 species
AT2G04190 No alias TRAF-like family protein 0.05 OrthoFinder output from all 47 species
AT3G20370 No alias TRAF-like family protein 0.06 OrthoFinder output from all 47 species
AT3G22080 No alias TRAF-like family protein 0.03 OrthoFinder output from all 47 species
AT4G09780 No alias TRAF-like family protein 0.03 OrthoFinder output from all 47 species
AT5G26260 No alias TRAF-like family protein 0.03 OrthoFinder output from all 47 species
AT5G26280 No alias TRAF-like family protein 0.03 OrthoFinder output from all 47 species
Solyc07g049520.2.1 Solyc07g049520 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 255 380
IPR002083 MATH/TRAF_dom 104 230
No external refs found!