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  5. GSVIVT01037695001

GSVIVT01037695001 (EMB2729, BE1)


Aliases : EMB2729, BE1

Description : Carbohydrate metabolism.starch metabolism.synthesis.starch branching enzyme


Gene families : OG0001102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037695001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00224220 EMB2729, BE1,... Carbohydrate metabolism.starch... 0.1 OrthoFinder output from all 47 species
AT3G20440 EMB2729, BE1 Alpha amylase family protein 0.1 OrthoFinder output from all 47 species
Adi_g008953 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07372 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0034.g025292 SBE2.2 EC_2.4 glycosyltransferase & original description: CDS=218-2266 0.03 OrthoFinder output from all 47 species
Cba_g18095 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07721 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08904 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04438 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19998 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_38481 EMB2729, BE1 starch branching enzyme 0.04 OrthoFinder output from all 47 species
Len_g13716 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g04199 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18393 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435727g0010 EMB2729, BE1 1,4-alpha-glucan-branching enzyme 3,... 0.05 OrthoFinder output from all 47 species
Mp3g21170.1 EMB2729, BE1 starch branching enzyme 0.04 OrthoFinder output from all 47 species
Msp_g24621 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25017 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10952 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44500 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08439 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03209 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48559 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19444 No alias starch branching enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g064830.3.1 EMB2729, BE1,... starch branching enzyme 0.05 OrthoFinder output from all 47 species
Zm00001e027838_P001 EMB2729, BE1,... starch branching enzyme 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 119 181
IPR006047 Glyco_hydro_13_cat_dom 422 495
IPR006048 A-amylase/branching_C 802 890
No external refs found!