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  5. GSVIVT01037516001

GSVIVT01037516001


Description : Cold shock protein 1 OS=Arabidopsis thaliana


Gene families : OG0004324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037516001
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Aop_g14502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g073810.4.1 Solyc06g073810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 167 182
IPR001878 Znf_CCHC 273 289
IPR001878 Znf_CCHC 125 140
No external refs found!