GSVIVT01037379001 (RHC1A)


Aliases : RHC1A

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037379001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00135070 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00119p00089020 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT3G13430 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G19950 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G01980 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g008105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102739 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g01231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05398 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g14287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20533 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene27542.t1 Aspi01Gene27542 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0125.g048560 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0149.g053204 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Cba_g03180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G061800.1 Ceric.02G061800 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.14G083100.1 Ceric.14G083100 not classified & original description: pacid=50633279... 0.03 OrthoFinder output from all 47 species
Dac_g21809 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g03331 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Gb_26865 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g59760.1 ATCRT1, LOC_Os03g59760 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Lfl_g11310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_44557g0010 CIP8 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Pir_g25104 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g43877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012146 No alias not classified & original description: CDS=1-969 0.03 OrthoFinder output from all 47 species
Sam_g27709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10775 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g14660 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g55156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028905_P001 RHC1A, Zm00001e028905 Probable E3 ubiquitin-protein ligase RHC1A... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 101 143
No external refs found!