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  5. GSVIVT01037259001

GSVIVT01037259001


Description : PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037259001
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00031410 evm_27.TU.AmTr_v1... PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
AT1G65920 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 OrthoFinder output from all 47 species
AT5G19420 No alias Regulator of chromosome condensation (RCC1) family with... 0.02 OrthoFinder output from all 47 species
Adi_g036534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65113.t1 Aspi01Gene65113 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0002.g001281 No alias not classified & original description: CDS=1653-4202 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023605 No alias not classified & original description: CDS=735-3878 0.04 OrthoFinder output from all 47 species
Cba_g27720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11534 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g30318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_13554 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Gb_31523 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
LOC_Os05g01610.1 PRAF1, LOC_Os05g01610 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Len_g14356 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_136157g0010 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
Msp_g09378 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g15592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05000 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo112120 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Smo180358 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Solyc04g071040.4.1 PRAF1, Solyc04g071040 PH, RCC1 and FYVE domains-containing protein 1... 0.06 OrthoFinder output from all 47 species
Tin_g11713 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007456_P003 PRAF1, Zm00001e007456 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Zm00001e032303_P001 Zm00001e032303 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR001849 PH_domain 16 122
IPR027988 BRX_N 763 797
IPR013591 Brevis_radix_dom 880 934
IPR000408 Reg_chr_condens 347 396
IPR000408 Reg_chr_condens 399 448
IPR000408 Reg_chr_condens 453 500
IPR000408 Reg_chr_condens 263 311
IPR000306 Znf_FYVE 504 570
No external refs found!