GSVIVT01037186001 (ATSPS4F)


Aliases : ATSPS4F

Description : Carbohydrate metabolism.sucrose metabolism.synthesis.sucrose-phosphate synthase


Gene families : OG0000773 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000773_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037186001

Target Alias Description ECC score Gene Family Method Actions
Cba_g20799 SPS3F, ATSPS3F EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29795 SPS3F, ATSPS3F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38057 SPS3F, ATSPS3F EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15505 SPS3F, ATSPS3F EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_17920 SPS3F, ATSPS3F sucrose-phosphate synthase 0.03 OrthoFinder output from all 47 species
Mp3g02650.1 SPS3F, ATSPS3F sucrose-phosphate synthase 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011342 SPS3F, ATSPS3F EC_2.4 glycosyltransferase & original description: CDS=919-4104 0.02 OrthoFinder output from all 47 species
Zm00001e022224_P001 SPS1F, ATSPS1F,... sucrose-phosphate synthase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005985 sucrose metabolic process IEA Interproscan
MF GO:0016157 sucrose synthase activity IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
InterPro domains Description Start Stop
IPR000368 Sucrose_synth 168 427
IPR006380 SPP-like_dom 781 965
IPR001296 Glyco_trans_1 470 643
No external refs found!