1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01037134001

GSVIVT01037134001


Description : Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana


Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037134001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00115860 evm_27.TU.AmTr_v1... Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G76460 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 OrthoFinder output from all 47 species
AT1G78260 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 OrthoFinder output from all 47 species
Aev_g11307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07589.t1 Aspi01Gene07589 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015267 No alias not classified & original description: CDS=1-609 0.03 OrthoFinder output from all 47 species
Azfi_s0442.g070359 No alias not classified & original description: CDS=461-1399 0.02 OrthoFinder output from all 47 species
Cba_g11789 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G084700.1 Ceric.06G084700 not classified & original description: pacid=50620456... 0.03 OrthoFinder output from all 47 species
Ceric.30G042200.1 Ceric.30G042200 not classified & original description: pacid=50608009... 0.03 OrthoFinder output from all 47 species
Dde_g31082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02374 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g044470.3.1 Solyc11g044470 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 18 73
No external refs found!