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  5. GSVIVT01037034001

GSVIVT01037034001 (AGL62)


Aliases : AGL62

Description : RNA biosynthesis.transcriptional activation.MADS box transcription factor


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037034001
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT1G77980 AGL66 AGAMOUS-like 66 0.03 OrthoFinder output from all 47 species
AT5G46320 No alias MADS-box family protein 0.03 OrthoFinder output from all 47 species
Adi_g116631 AGL65 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17392 AGL71 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20111 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51470 AGL10, CAL1, CAL MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17806.t1 SHP2, AGL5,... MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44620.t2 AGL6, Aspi01Gene44620 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0684.g082058 AGL21 MADS/AGL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g27765 AGL30 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G029400.1 AGL16, Ceric.05G029400 MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g06265 AGL15 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13582 GL19, AGL19 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01038474001 AGL16 RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
LOC_Os01g66030.1 PI, LOC_Os01g66030 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Pir_g02948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40304 GL19, AGL19 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09107 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027031_P001 PI, Zm00001e027031 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 18 64
No external refs found!