GSVIVT01036983001 (AGD2)


Aliases : AGD2

Description : Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.LL-diaminopimelate aminotransferase


Gene families : OG0001991 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001991_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036983001

Target Alias Description ECC score Gene Family Method Actions
AT4G33680 AGD2 Pyridoxal phosphate (PLP)-dependent transferases... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020537.26 AGD2 Probable LL-diaminopimelate aminotransferase,... 0.01 OrthoFinder output from all 47 species
Cre17.g734200 AGD2 Amino acid metabolism.biosynthesis.aspartate... 0.02 OrthoFinder output from all 47 species
LOC_Os03g18810.1 AGD2, LOC_Os03g18810 LL-diaminopimelate aminotransferase 0.1 OrthoFinder output from all 47 species
Solyc06g073280.3.1 AGD2, Solyc06g073280 LL-diaminopimelate aminotransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0003879 ATP phosphoribosyltransferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 28 391
No external refs found!