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  5. GSVIVT01036686001

GSVIVT01036686001 (HUA1)


Aliases : HUA1

Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor


Gene families : OG0002527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036686001

Target Alias Description ECC score Gene Family Method Actions
Ala_g06166 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Cba_g12436 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ceric.04G006200.1 HUA1, Ceric.04G006200 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G016300.1 HUA1, Ceric.30G016300 regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Dcu_g11355 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Gb_15324 HUA1 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Len_g13847 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Nbi_g06907 HUA1 regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Pir_g19930 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ppi_g42316 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018722 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sam_g13535 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sam_g39859 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Spa_g03269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31290 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Spa_g37348 HUA1 regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 266 288
IPR000571 Znf_CCCH 216 241
IPR000571 Znf_CCCH 164 188
IPR000571 Znf_CCCH 426 447
IPR000571 Znf_CCCH 474 499
IPR000571 Znf_CCCH 341 364
No external refs found!