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  5. GSVIVT01036664001

GSVIVT01036664001 (TRX P, TRX z)


Aliases : TRX P, TRX z

Description : RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP10/TrxZ component


Gene families : OG0002657 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002657_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036664001
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AT3G06730 TRX P, TRX z Thioredoxin z 0.03 OrthoFinder output from all 47 species
Ceric.35G032100.1 TRX P, TRX z,... cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.05 OrthoFinder output from all 47 species
LOC_Os08g29110.1 TRX P, TRX z,... Z-type thioredoxin. PAP10/TrxZ cofactor of... 0.05 OrthoFinder output from all 47 species
Msp_g09761 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.03 OrthoFinder output from all 47 species
Pir_g13293 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.02 OrthoFinder output from all 47 species
Solyc01g096480.2.1 TRX P, TRX z,... Z-type thioredoxin. PAP10/TrxZ cofactor of... 0.05 OrthoFinder output from all 47 species
Zm00001e004249_P001 TRX P, TRX z,... Z-type thioredoxin. PAP10/TrxZ cofactor of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 79 165
No external refs found!