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Aliases : COL2, ATCOL2
Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/CONSTANS transcription factor
Gene families : OG0001141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001141_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00006p00262710 | COL2, ATCOL2,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.1 | OrthoFinder output from all 47 species | |
| AT2G24790 | COL3, ATCOL3 | CONSTANS-like 3 | 0.05 | OrthoFinder output from all 47 species | |
| AT3G02380 | COL2, ATCOL2 | CONSTANS-like 2 | 0.14 | OrthoFinder output from all 47 species | |
| AT5G15850 | COL1, ATCOL1 | CONSTANS-like 1 | 0.09 | OrthoFinder output from all 47 species | |
| AT5G24930 | ATCOL4, COL4 | CONSTANS-like 4 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G57660 | ATCOL5, COL5 | CONSTANS-like 5 | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g04849 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g19112 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009656 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: CDS=186-1232 | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.04G058700.1 | ATCOL4, COL4,... | floral promoter *(CONSTANS) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Cre12.g534100 | COL2, ATCOL2 | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g09279 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09042 | COL3, ATCOL3 | floral promoter *(CONSTANS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g08150.1 | ATCOL5, COL5,... | Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g39710.1 | ATCOL5, COL5,... | transcription factor (BBX-CO) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os04g42020.1 | ATCOL5, COL5,... | transcription factor (BBX-CO) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g44450.1 | ATCOL5, COL5,... | Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g06464.1 | COL2, ATCOL2,... | Zinc finger protein CO3 OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g41100.1 | ATCOL5, COL5,... | Transcription factor GHD7 OS=Oryza sativa subsp.... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g17115 | COL1, ATCOL1 | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g08431 | COL2, ATCOL2 | floral promoter *(CONSTANS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Mp8g13470.1 | ATCOL4, COL4 | transcription factor (BBX-CO) | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g20271 | ATCOL5, COL5 | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g34612 | ATCOL4, COL4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g48282 | COL1, ATCOL1 | floral promoter *(CONSTANS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g002977 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: CDS=1-1206 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g06078 | No alias | floral promoter *(CONSTANS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16637 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16644 | No alias | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g26599 | No alias | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo185898 | ATCOL4, COL4 | RNA biosynthesis.transcriptional activation.C2C2... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc02g089540.3.1 | COL2, ATCOL2,... | transcription factor (BBX-CO) | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g06394 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007691_P001 | Zm00001e007691 | transcription factor (BBX-CO) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e037706_P002 | ATCOL5, COL5,... | Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e037873_P001 | ATCOL4, COL4,... | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e041152_P001 | ATCOL5, COL5,... | transcription factor (BBX-CO) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| No external refs found! |