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  5. GSVIVT01036441001

GSVIVT01036441001


No description available


Gene families : OG0000785 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000785_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036441001
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00209930 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AT1G21560 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
AT1G67780 No alias Zinc-finger domain of monoamine-oxidase A repressor R1 protein 0.05 OrthoFinder output from all 47 species
AT2G23530 No alias Zinc-finger domain of monoamine-oxidase A repressor R1 0.05 OrthoFinder output from all 47 species
AT5G38690 No alias Zinc-finger domain of monoamine-oxidase A repressor R1 protein 0.03 OrthoFinder output from all 47 species
Ala_g20760 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03213 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.1 OrthoFinder output from all 47 species
Aop_g20889 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.18 OrthoFinder output from all 47 species
Aop_g24005 No alias not classified & original description: none 0.22 OrthoFinder output from all 47 species
Aspi01Gene00971.t1 Aspi01Gene00971 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25905.t1 Aspi01Gene25905 component *(DDR) of ISWI chromatin remodeling complex &... 0.09 OrthoFinder output from all 47 species
Azfi_s0008.g011647 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Ceric.07G054500.1 Ceric.07G054500 not classified & original description: pacid=50627528... 0.08 OrthoFinder output from all 47 species
Ceric.22G043400.1 Ceric.22G043400 not classified & original description: pacid=50614394... 0.05 OrthoFinder output from all 47 species
Ceric.23G067000.1 Ceric.23G067000 component *(DDR) of ISWI chromatin remodeling complex &... 0.2 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021582.33 No alias No description available 0.06 OrthoFinder output from all 47 species
Cre12.g531350 No alias No description available 0.09 OrthoFinder output from all 47 species
Dac_g09060 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.1 OrthoFinder output from all 47 species
Dac_g29276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33884 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.16 OrthoFinder output from all 47 species
Ehy_g19312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_14005 No alias no hits & (original description: none) 0.25 OrthoFinder output from all 47 species
LOC_Os11g36030.1 LOC_Os11g36030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g09082 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.09 OrthoFinder output from all 47 species
Len_g30723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38243 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.1 OrthoFinder output from all 47 species
MA_10426537g0020 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
MA_109451g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Msp_g13607 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.16 OrthoFinder output from all 47 species
Nbi_g03121 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.18 OrthoFinder output from all 47 species
Ore_g19547 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30889 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0097.g019426 No alias not classified & original description: CDS=119-1684 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021110 No alias not classified & original description: CDS=70-1113 0.08 OrthoFinder output from all 47 species
Sam_g06325 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.12 OrthoFinder output from all 47 species
Solyc02g063060.4.1 Solyc02g063060 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Solyc02g090200.3.1 Solyc02g090200 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc11g072250.2.1 Solyc11g072250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g39832 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.09 OrthoFinder output from all 47 species
Zm00001e011227_P001 Zm00001e011227 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Zm00001e022617_P002 Zm00001e022617 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
Zm00001e024403_P001 Zm00001e024403 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018501 DDT_dom 245 306
IPR018866 Znf-4CXXC_R1 59 158
No external refs found!