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  5. GSVIVT01036085001

GSVIVT01036085001


Description : Casparian strip membrane protein 2 OS=Vitis vinifera


Gene families : OG0001933 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001933_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036085001

Target Alias Description ECC score Gene Family Method Actions
AT3G06390 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
AT4G20390 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
GSVIVT01008618001 No alias CASP-like protein 1F1 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
GSVIVT01037957001 No alias CASP-like protein 1B2 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
LOC_Os02g51010.1 LOC_Os02g51010 Casparian strip membrane protein 4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os12g41690.1 LOC_Os12g41690 CASP-like protein 1B1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Solyc01g067330.3.1 Solyc01g067330 CASP-like protein 1E1 OS=Glycine max... 0.03 OrthoFinder output from all 47 species
Zm00001e006491_P001 Zm00001e006491 Casparian strip membrane protein 2 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Zm00001e024279_P001 Zm00001e024279 Casparian strip membrane protein 2 OS=Sorghum bicolor... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 38 186
No external refs found!