GSVIVT01036046001 (MBD11, ATMBD11)

Aliases : MBD11, ATMBD11

Description : Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana

Gene families : OG0000919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01036046001

Target	Alias	Description	ECC score	Gene Family Method
Adi_g022930	No alias	methylation reader *(MBD10-11) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g058503	No alias	methylation reader *(MBD10-11) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g097328	MBD10	methylation reader *(MBD10-11) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g12114	MBD10	methylation reader *(MBD10-11) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g05333	MBD11, ATMBD11	methylation reader *(MBD10-11) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g15405	No alias	methylation reader *(MBD10-11) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018451	MBD10	methylation reader *(MBD10-11) & original description:...	0.02	OrthoFinder output from all 47 species
Spa_g12685	MBD11, ATMBD11	methylation reader *(MBD10-11) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g47995	No alias	methylation reader *(MBD10-11) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g28634	No alias	methylation reader *(MBD10-11) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008134	transcription factor binding	IEP	HCCA
MF	GO:0017025	TBP-class protein binding	IEP	HCCA
MF	GO:0140296	general transcription initiation factor binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	22	84

External Links

No external refs found!