Aliases : ATCOL4, COL4
Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/CONSTANS transcription factor
Gene families : OG0001141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001141_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00006p00262710 | COL2, ATCOL2,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00019p00192190 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
AT2G24790 | COL3, ATCOL3 | CONSTANS-like 3 | 0.06 | OrthoFinder output from all 47 species | |
AT3G02380 | COL2, ATCOL2 | CONSTANS-like 2 | 0.09 | OrthoFinder output from all 47 species | |
AT5G15850 | COL1, ATCOL1 | CONSTANS-like 1 | 0.06 | OrthoFinder output from all 47 species | |
AT5G24930 | ATCOL4, COL4 | CONSTANS-like 4 | 0.05 | OrthoFinder output from all 47 species | |
Ala_g04849 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g00630 | COL3, ATCOL3 | floral promoter *(CONSTANS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene31427.t1 | ATCOL4, COL4,... | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0006.g009656 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: CDS=186-1232 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g04402 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g10222 | ATCOL5, COL5 | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cre12.g534100 | COL2, ATCOL2 | No description available | 0.02 | OrthoFinder output from all 47 species | |
Dac_g09279 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g08689 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g11774 | COL3, ATCOL3 | floral promoter *(CONSTANS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Gb_41704 | ATCOL4, COL4 | transcription factor (BBX-CO) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g08150.1 | ATCOL5, COL5,... | Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g39710.1 | ATCOL5, COL5,... | transcription factor (BBX-CO) | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os06g16370.1 | COL2, ATCOL2,... | transcription factor (BBX-CO) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g44450.1 | ATCOL5, COL5,... | Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os08g15050.1 | ATCOL5, COL5,... | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os09g06464.1 | COL2, ATCOL2,... | Zinc finger protein CO3 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g41100.1 | ATCOL5, COL5,... | Transcription factor GHD7 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g08431 | COL2, ATCOL2 | floral promoter *(CONSTANS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Mp8g13470.1 | ATCOL4, COL4 | transcription factor (BBX-CO) | 0.06 | OrthoFinder output from all 47 species | |
Ore_g20271 | ATCOL5, COL5 | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g34612 | ATCOL4, COL4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g48282 | COL1, ATCOL1 | floral promoter *(CONSTANS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0006.g002977 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: CDS=1-1206 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0011.g005340 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: CDS=210-1442 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g06077 | No alias | floral promoter *(CONSTANS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g26599 | No alias | floral promoter *(CONSTANS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g089540.3.1 | COL2, ATCOL2,... | transcription factor (BBX-CO) | 0.04 | OrthoFinder output from all 47 species | |
Solyc12g096500.2.1 | ATCOL4, COL4,... | transcription factor (BBX-CO) | 0.03 | OrthoFinder output from all 47 species | |
Tin_g27278 | COL1, ATCOL1 | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e002319_P001 | ATCOL4, COL4,... | Transcription factor GHD7 OS=Oryza sativa subsp.... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e007691_P001 | Zm00001e007691 | transcription factor (BBX-CO) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013804_P001 | ATCOL5, COL5,... | Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e037706_P002 | ATCOL5, COL5,... | Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... | 0.09 | OrthoFinder output from all 47 species | |
Zm00001e037873_P001 | ATCOL4, COL4,... | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e041152_P001 | ATCOL5, COL5,... | transcription factor (BBX-CO) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
No external refs found! |