GSVIVT01035921001 (KNAT3)

Aliases : KNAT3

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.KNOX transcription factor

Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01035921001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00026p00162850	KNAT3,...	RNA biosynthesis.transcriptional activation.HB...	0.07	OrthoFinder output from all 47 species
AMTR_s00045p00169620	KNAT6, KNAT6L,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
AT1G62360	BUM1, SHL, STM,...	KNOX/ELK homeobox transcription factor	0.03	OrthoFinder output from all 47 species
AT1G70510	KNAT2, ATK1	KNOTTED-like from Arabidopsis thaliana 2	0.03	OrthoFinder output from all 47 species
AT4G08150	BP, BP1, KNAT1	KNOTTED-like from Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT4G32040	KNAT5	KNOTTED1-like homeobox gene 5	0.03	OrthoFinder output from all 47 species
AT5G11060	KNAT4	KNOTTED1-like homeobox gene 4	0.05	OrthoFinder output from all 47 species
Adi_g098728	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g16413	KNAT4	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g21619	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g19497	KNAT4	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g15588	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g17223	KNAT3	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g06749	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene56442.t2	KNAT3, Aspi01Gene56442	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene61508.t1	KNAT3, Aspi01Gene61508	KNOX-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g15698	KNAT4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.13G020400.1	KNAT3, Ceric.13G020400	KNOX-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g16830	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g23862	KNAT4	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g07800	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g24670	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01009273001	BP, BP1, KNAT1	RNA biosynthesis.transcriptional activation.HB...	0.06	OrthoFinder output from all 47 species
GSVIVT01031241001	KNAT6, KNAT6L, KNAT6S	RNA biosynthesis.transcriptional activation.HB...	0.05	OrthoFinder output from all 47 species
LOC_Os02g08544.1	KNAT3, LOC_Os02g08544	transcription factor (KNOX)	0.05	OrthoFinder output from all 47 species
LOC_Os08g19650.1	KNAT3, LOC_Os08g19650	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
Lfl_g06541	BP, BP1, KNAT1	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_10428446g0010	BP, BP1, KNAT1	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
MA_10428500g0010	KNAT3	transcription factor (KNOX)	0.04	OrthoFinder output from all 47 species
MA_3582g0010	KNAT3	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
Ore_g17777	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g25529	BP, BP1, KNAT1	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g25530	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g35975	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c18_18750V3.1	Pp3c18_18750	KNOTTED1-like homeobox gene 6	0.01	OrthoFinder output from all 47 species
Pp3c19_5610V3.1	Pp3c19_5610	No annotation	0.01	OrthoFinder output from all 47 species
Pp3c19_5620V3.1	BP, BP1, KNAT1,...	KNOTTED-like from Arabidopsis thaliana 2	0.02	OrthoFinder output from all 47 species
Pp3c21_10320V3.1	BUM1, SHL, STM,...	KNOTTED-like from Arabidopsis thaliana 2	0.01	OrthoFinder output from all 47 species
Pp3c5_26440V3.1	KNAT3, Pp3c5_26440	KNOTTED1-like homeobox gene 3	0.01	OrthoFinder output from all 47 species
Ppi_g10499	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004352	KNAT4	KNOX-type transcription factor & original description: CDS=1-1356	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018782	KNAT2, ATK1	not classified & original description: CDS=1-1071	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0250.g026749	KNAT3	not classified & original description: CDS=1-780	0.03	OrthoFinder output from all 47 species
Solyc01g100510.4.1	KNAT6, KNAT6L,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Solyc04g077210.3.1	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Solyc07g007120.3.1	KNAT3, Solyc07g007120	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
Solyc08g041820.3.1	KNAT3, Solyc08g041820	transcription factor (KNOX)	0.04	OrthoFinder output from all 47 species
Solyc12g010410.3.1	KNAT4, Solyc12g010410	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
Spa_g22911	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g29512	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g54752	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g45614	KNAT4	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e000173_P003	KNAT7, IXR11,...	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
Zm00001e005545_P001	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
Zm00001e005547_P001	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Zm00001e011538_P001	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.05	OrthoFinder output from all 47 species
Zm00001e017489_P001	KNAT6, KNAT6L,...	transcription factor (KNOX)	0.05	OrthoFinder output from all 47 species
Zm00001e027562_P001	KNAT6, KNAT6L,...	transcription factor (KNOX)	0.05	OrthoFinder output from all 47 species
Zm00001e029453_P001	KNAT6, KNAT6L,...	transcription factor (KNOX)	0.07	OrthoFinder output from all 47 species
Zm00001e039044_P001	KNAT7, IXR11,...	transcription factor (KNOX)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0016846	carbon-sulfur lyase activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005541	KNOX2	2	52
IPR005539	ELK_dom	110	131
IPR008422	Homeobox_KN_domain	150	189

External Links

No external refs found!

GSVIVT01035921001 (KNAT3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation