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  5. GSVIVT01035686001

GSVIVT01035686001 (ATRD22, RD22)


Aliases : ATRD22, RD22

Description : BURP domain protein RD22 OS=Arabidopsis thaliana


Gene families : OG0000218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035686001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00088650 ATRD22, RD22,... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AT1G23760 JP630, PG3 BURP domain-containing protein 0.02 OrthoFinder output from all 47 species
AT1G60390 PG1 polygalacturonase 1 0.02 OrthoFinder output from all 47 species
AT1G70370 PG2 polygalacturonase 2 0.01 OrthoFinder output from all 47 species
Adi_g100324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g127854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04221 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g19983 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g25890 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06653 ATRD22, RD22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g63303 PG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0084.g039069 No alias not classified & original description: CDS=1-924 0.02 OrthoFinder output from all 47 species
Cba_g03878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z105900.1 Ceric.1Z105900 not classified & original description: pacid=50639168... 0.02 OrthoFinder output from all 47 species
Dac_g00679 JP630, PG3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14261 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16859 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_06614 PG2 BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os06g13240.1 PG1, LOC_Os06g13240 BURP domain-containing protein 9 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os08g29200.1 PG2, LOC_Os08g29200 non-catalytic polygalacturonase regulator 0.02 OrthoFinder output from all 47 species
Len_g23146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40095 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g55574 PG2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10182290g0010 PG2 BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
MA_19057g0010 JP630, PG3 non-catalytic polygalacturonase regulator 0.02 OrthoFinder output from all 47 species
MA_462957g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_5913418g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_63321g0010 ATRD22, RD22 BURP domain protein RD22 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Msp_g06951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06952 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g11951 PG1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g20415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g53534 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00824 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g11148 PG2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004310 JP630, PG3 not classified & original description: CDS=43-1077 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011800 ATRD22, RD22 not classified & original description: CDS=1-1551 0.02 OrthoFinder output from all 47 species
Sam_g06268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g109500.4.1 USPL1, ATUSPL1,... BURP domain protein USPL1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc02g062310.1.1 Solyc02g062310 BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Solyc08g068130.1.1 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Spa_g12000 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g44636 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g14938 PG1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g30249 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44059 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003438_P003 ATRD22, RD22,... Protein RAFTIN 1A OS=Triticum aestivum... 0.01 OrthoFinder output from all 47 species
Zm00001e029096_P002 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004873 BURP_dom 3 100
No external refs found!