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  5. GSVIVT01035666001

GSVIVT01035666001 (AtLa1, La1)


Aliases : AtLa1, La1

Description : La protein 1 OS=Arabidopsis thaliana


Gene families : OG0003172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003172_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035666001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00056900 AtLa1, La1,... La protein 1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT4G32720 AtLa1, La1 La protein 1 0.06 OrthoFinder output from all 47 species
Adi_g012248 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11426 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.26G010200.1 AtLa1, La1,... nascent RNA chaperone *(LA) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g09267 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02803 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035689001 AtLa1, La1 La protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g39700.1 AtLa1, La1,... RNA chaperone (LA). rRNA chaperone (IRP2) 0.03 OrthoFinder output from all 47 species
Lfl_g25839 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.02 OrthoFinder output from all 47 species
MA_697179g0010 AtLa1, La1 RNA chaperone (LA). rRNA chaperone (IRP2) 0.04 OrthoFinder output from all 47 species
MA_78251g0010 AtLa1, La1 La protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp1g04820.1 AtLa1, La1 RNA chaperone (LA). rRNA chaperone (IRP2) 0.04 OrthoFinder output from all 47 species
Ore_g43153 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c21_14880V3.1 AtLa1, La1, Pp3c21_14880 La protein 1 0.02 OrthoFinder output from all 47 species
Ppi_g04561 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g068310.3.1 AtLa1, La1,... RNA chaperone (LA). rRNA chaperone (IRP2) 0.05 OrthoFinder output from all 47 species
Tin_g31164 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015074_P001 AtLa1, La1,... RNA chaperone (LA). rRNA chaperone (IRP2) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 123 177
IPR014886 La_xRRM 267 359
IPR006630 La_HTH 14 84
No external refs found!