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  5. GSVIVT01035560001

GSVIVT01035560001 (RBR, ATRBR1, RBR1, RB1, RB)


Aliases : RBR, ATRBR1, RBR1, RB1, RB

Description : Cell cycle.interphase.G1 phase.RB key regulator


Gene families : OG0002400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002400_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035560001
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Adi_g111188 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.03 OrthoFinder output from all 47 species
Als_g20749 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.02 OrthoFinder output from all 47 species
Aob_g30798 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.02 OrthoFinder output from all 47 species
Cba_g25385 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.02 OrthoFinder output from all 47 species
Dcu_g01967 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.02 OrthoFinder output from all 47 species
LOC_Os08g42600.1 RBR, ATRBR1,... cell cycle interphase key regulator 0.03 OrthoFinder output from all 47 species
LOC_Os11g32900.1 RBR, ATRBR1,... cell cycle interphase key regulator 0.06 OrthoFinder output from all 47 species
MA_10435560g0010 RBR, ATRBR1,... cell cycle interphase key regulator 0.04 OrthoFinder output from all 47 species
Ore_g10285 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.03 OrthoFinder output from all 47 species
Solyc09g091280.4.1 RBR, ATRBR1,... cell cycle interphase key regulator 0.1 OrthoFinder output from all 47 species
Zm00001e003716_P001 RBR, ATRBR1,... cell cycle interphase key regulator 0.09 OrthoFinder output from all 47 species
Zm00001e024213_P002 RBR, ATRBR1,... cell cycle interphase key regulator 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0051726 regulation of cell cycle IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002719 RB_B 727 854
IPR024599 RB_N 90 228
IPR002720 RB_A 405 603
No external refs found!