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  5. GSVIVT01035559001

GSVIVT01035559001 (SYP111, ATSYP111, KN)


Aliases : SYP111, ATSYP111, KN

Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP1-group protein


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035559001
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00039700 SYP111,... Vesicle trafficking.SNARE target membrane recognition... 0.2 OrthoFinder output from all 47 species
AMTR_s00103p00119740 SYP111,... Vesicle trafficking.SNARE target membrane recognition... 0.23 OrthoFinder output from all 47 species
AT1G08560 SYP111, ATSYP111, KN syntaxin of plants 111 0.08 OrthoFinder output from all 47 species
Als_g02865 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.07 OrthoFinder output from all 47 species
Als_g04211 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Aop_g01106 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.23 OrthoFinder output from all 47 species
Aspi01Gene10906.t1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Aspi01Gene35684.t1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.11 OrthoFinder output from all 47 species
Azfi_s0032.g024952 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Cba_g10610 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ceric.17G026900.1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.2 OrthoFinder output from all 47 species
Dac_g15957 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Dcu_g14231 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.15 OrthoFinder output from all 47 species
Dcu_g51782 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
LOC_Os03g52650.1 SYP111,... Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.21 OrthoFinder output from all 47 species
Len_g49180 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Lfl_g23596 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.09 OrthoFinder output from all 47 species
Lfl_g40027 SYP123, ATSYP123 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
MA_132768g0010 ATSYP124, SYP124 SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
MA_99482g0010 ATSYP124, SYP124 SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
Msp_g11528 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.16 OrthoFinder output from all 47 species
Nbi_g04089 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.2 OrthoFinder output from all 47 species
Ore_g01296 SYP132, ATSYP132 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ore_g43138 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.07 OrthoFinder output from all 47 species
Pnu_g12258 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ppi_g20351 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016734 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024205 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.08 OrthoFinder output from all 47 species
Smo130326 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.14 OrthoFinder output from all 47 species
Solyc06g053760.3.1 SYP111,... Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.27 OrthoFinder output from all 47 species
Spa_g06782 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.09 OrthoFinder output from all 47 species
Tin_g11166 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.09 OrthoFinder output from all 47 species
Tin_g28595 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Zm00001e012082_P001 SYP111,... Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 72 205
No external refs found!