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  5. LOC_Os04g42370.1

LOC_Os04g42370.1


Description : component TRS120/VAN4 of TRAPP-II complex-specific components


Gene families : OG_01_0004457 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004457_tree ,
OG_02_0004070 (LandPlants) Phylogenetic Tree(s): OG_02_0004070_tree ,
OG_03_0006465 (SeedPlants) Phylogenetic Tree(s): OG_03_0006465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g42370.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00150010 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.TRAPP... 0.03 Archaeplastida
AT5G11040 TRS120, AtTRS120 TRS120 0.18 Archaeplastida
GSVIVT01035919001 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.1 Archaeplastida
Gb_03735 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.1 Archaeplastida
Mp1g21550.1 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.12 Archaeplastida
Pp3c19_10170V3.1 No alias TRS120 0.02 Archaeplastida
Solyc06g065840.3.1 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.12 Archaeplastida
Zm00001e007655_P001 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.15 Archaeplastida
AMTR_s00026p00150010 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.TRAPP... 0.03 LandPlants
AT5G11040 TRS120, AtTRS120 TRS120 0.19 LandPlants
GSVIVT01035919001 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.11 LandPlants
Gb_03735 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.09 LandPlants
Mp1g21550.1 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.12 LandPlants
Pp3c19_10170V3.1 No alias TRS120 0.02 LandPlants
Smo165701 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.01 LandPlants
Solyc06g065840.3.1 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.13 LandPlants
Zm00001e007655_P001 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.15 LandPlants
AMTR_s00026p00150010 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.TRAPP... 0.03 SeedPlants
AT5G11040 TRS120, AtTRS120 TRS120 0.19 SeedPlants
GSVIVT01035919001 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.11 SeedPlants
Gb_03735 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.09 SeedPlants
Solyc06g065840.3.1 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.13 SeedPlants
Zm00001e007655_P001 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.15 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013935 TRAPP_II_complex_Trs120 199 267
IPR013935 TRAPP_II_complex_Trs120 333 716
IPR013935 TRAPP_II_complex_Trs120 811 1132
IPR013935 TRAPP_II_complex_Trs120 10 195
No external refs found!