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Description : RNA biosynthesis.transcriptional activation.Trihelix transcription factor
Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01035465001 | |
| Cluster | HCCA: Cluster_15 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G33240 | AT-GTL1, GTL1, AT-GTL2 | GT-2-like 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G76880 | No alias | Duplicated homeodomain-like superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g06719 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g02188 | AT-GTL1, GTL1, AT-GTL2 | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g22030 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene07378.t2 | AT-GT2, GT2,... | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene54632.t1 | Aspi01Gene54632 | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene69749.t1 | AT-GTL1, GTL1,... | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g72625 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G000200.1 | Ceric.36G000200 | Trihelix-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g13661 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g01380.1 | AT-GT2, GT2,... | transcription factor (Trihelix) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os03g02240.1 | AT-GT2, GT2,... | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g19944 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10427500g0030 | No alias | Trihelix transcription factor GTL1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g01302 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g11220 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42670 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0016.g006964 | No alias | Trihelix-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0157.g023745 | No alias | Trihelix-type transcription factor & original... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e000092_P003 | AT-GTL1, GTL1,... | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004364_P002 | Zm00001e004364 | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |