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  5. GSVIVT01035454001

GSVIVT01035454001


Description : Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.electron donor-binding subcomplex E.NdhU component


Gene families : OG0009119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035454001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00220440 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.1 OrthoFinder output from all 47 species
AT5G21430 No alias Chaperone DnaJ-domain superfamily protein 0.17 OrthoFinder output from all 47 species
Aev_g00596 No alias component *(NdhU) of NDH electron donor-binding... 0.06 OrthoFinder output from all 47 species
Ala_g27216 No alias component *(NdhU) of NDH electron donor-binding... 0.08 OrthoFinder output from all 47 species
Als_g17763 No alias component *(NdhU) of NDH electron donor-binding... 0.03 OrthoFinder output from all 47 species
Aob_g31323 No alias component *(NdhU) of NDH electron donor-binding... 0.07 OrthoFinder output from all 47 species
Aop_g15652 No alias component *(NdhU) of NDH electron donor-binding... 0.07 OrthoFinder output from all 47 species
Aspi01Gene50041.t1 Aspi01Gene50041 component *(NdhU) of NDH electron donor-binding... 0.09 OrthoFinder output from all 47 species
Azfi_s0003.g007899 No alias component *(NdhU) of NDH electron donor-binding... 0.05 OrthoFinder output from all 47 species
Ceric.01G130500.1 Ceric.01G130500 component *(NdhU) of NDH electron donor-binding... 0.11 OrthoFinder output from all 47 species
Dcu_g11382 No alias component *(NdhU) of NDH electron donor-binding... 0.06 OrthoFinder output from all 47 species
Dde_g03697 No alias component *(NdhU) of NDH electron donor-binding... 0.06 OrthoFinder output from all 47 species
Ehy_g01998 No alias component *(NdhU) of NDH electron donor-binding... 0.03 OrthoFinder output from all 47 species
LOC_Os12g31460.1 LOC_Os12g31460 component NdhU of NDH electron donor-binding subcomplex E 0.12 OrthoFinder output from all 47 species
Len_g41767 No alias component *(NdhU) of NDH electron donor-binding... 0.09 OrthoFinder output from all 47 species
Lfl_g11791 No alias component *(NdhU) of NDH electron donor-binding... 0.04 OrthoFinder output from all 47 species
Mp2g09770.1 No alias component NdhU of NDH electron donor-binding subcomplex E 0.1 OrthoFinder output from all 47 species
Msp_g10562 No alias component *(NdhU) of NDH electron donor-binding... 0.04 OrthoFinder output from all 47 species
Nbi_g09588 No alias component *(NdhU) of NDH electron donor-binding... 0.03 OrthoFinder output from all 47 species
Ore_g10531 No alias component *(NdhU) of NDH electron donor-binding... 0.04 OrthoFinder output from all 47 species
Ppi_g25348 No alias component *(NdhU) of NDH electron donor-binding... 0.07 OrthoFinder output from all 47 species
Sam_g16511 No alias component *(NdhU) of NDH electron donor-binding... 0.05 OrthoFinder output from all 47 species
Sam_g23601 No alias component *(NdhU) of NDH electron donor-binding... 0.04 OrthoFinder output from all 47 species
Solyc06g082970.3.1 Solyc06g082970 component NdhU of NDH electron donor-binding subcomplex E 0.14 OrthoFinder output from all 47 species
Spa_g42281 No alias component *(NdhU) of NDH electron donor-binding... 0.05 OrthoFinder output from all 47 species
Tin_g00489 No alias component *(NdhU) of NDH electron donor-binding... 0.12 OrthoFinder output from all 47 species
Zm00001e039624_P001 Zm00001e039624 component NdhU of NDH electron donor-binding subcomplex E 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 91 152
No external refs found!