GSVIVT01035361001 (ATH1)


Aliases : ATH1

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor


Gene families : OG0000268 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000268_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035361001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00165p00052010 VAN, BLH9, RPL,... RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
AT1G75430 BLH11 BEL1-like homeodomain 11 0.07 OrthoFinder output from all 47 species
Aev_g18219 BLH2, SAW1 BEL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25561 EDA29, BLH1 BEL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene07089.t1 BLH7, Aspi01Gene07089 BEL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38190.t1 BEL1, Aspi01Gene38190 BEL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72493.t1 BLH2, SAW1,... BEL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000170 EDA29, BLH1 BEL-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007791 BLH2, SAW1 BEL-type transcription factor & original description: CDS=1-1590 0.05 OrthoFinder output from all 47 species
Azfi_s0007.g010693 EDA29, BLH1 BEL-type transcription factor & original description: CDS=1-2325 0.04 OrthoFinder output from all 47 species
Azfi_s0444.g070609 EDA29, BLH1 BEL-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.08G017100.1 EDA29, BLH1,... BEL-type transcription factor & original description:... 0.08 OrthoFinder output from all 47 species
Dcu_g49245 BLH2, SAW1 BEL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30113 EDA29, BLH1 BEL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05017 EDA29, BLH1 BEL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g62920.1 VAN, BLH9, RPL,... transcription factor (BEL) 0.04 OrthoFinder output from all 47 species
LOC_Os02g13310.1 ATH1, LOC_Os02g13310 transcription factor (BEL) 0.04 OrthoFinder output from all 47 species
LOC_Os03g47730.1 BLH11, LOC_Os03g47730 transcription factor (BEL) 0.03 OrthoFinder output from all 47 species
LOC_Os05g38120.1 VAN, BLH9, RPL,... transcription factor (BEL) 0.06 OrthoFinder output from all 47 species
LOC_Os06g01934.1 BEL1, LOC_Os06g01934 transcription factor (BEL) 0.04 OrthoFinder output from all 47 species
LOC_Os06g36680.1 ATH1, LOC_Os06g36680 transcription factor (BEL) 0.05 OrthoFinder output from all 47 species
LOC_Os12g06340.1 EDA29, BLH1,... transcription factor (BEL) 0.03 OrthoFinder output from all 47 species
Len_g30336 EDA29, BLH1 BEL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39954 BLH2, SAW1 BEL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17296 EDA29, BLH1 BEL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019369 EDA29, BLH1 BEL-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g16554 No alias BEL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo80869 BLH2, SAW1 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Solyc02g065490.4.1 BLH2, SAW1,... transcription factor (BEL) 0.03 OrthoFinder output from all 47 species
Solyc04g080780.2.1 BLH11, Solyc04g080780 transcription factor (BEL) 0.06 OrthoFinder output from all 47 species
Solyc08g065420.3.1 ATH1, Solyc08g065420 transcription factor (BEL) 0.12 OrthoFinder output from all 47 species
Solyc09g011380.3.1 VAN, BLH9, RPL,... transcription factor (BEL) 0.08 OrthoFinder output from all 47 species
Solyc11g069890.3.1 BLH8, PNF, Solyc11g069890 transcription factor (BEL) 0.14 OrthoFinder output from all 47 species
Tin_g14009 EDA29, BLH1 BEL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g46039 BLH2, SAW1 BEL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000495_P001 BLH7, Zm00001e000495 transcription factor (BEL) 0.04 OrthoFinder output from all 47 species
Zm00001e014436_P001 ATH1, Zm00001e014436 transcription factor (BEL) 0.06 OrthoFinder output from all 47 species
Zm00001e031812_P001 VAN, BLH9, RPL,... transcription factor (BEL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR006563 POX_dom 55 199
IPR008422 Homeobox_KN_domain 261 300
No external refs found!