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  5. GSVIVT01035348001

GSVIVT01035348001 (AtSHMT3, SHM3)


Aliases : AtSHMT3, SHM3

Description : Photosynthesis.photorespiration.serine hydroxymethyltransferase


Gene families : OG0000518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035348001
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Aev_g23906 SHM7 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Gb_16208 AtSHMT3, SHM3 serine hydroxymethyltransferase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 82 472
No external refs found!