1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01035145001

GSVIVT01035145001


Description : Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus


Gene families : OG0002525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002525_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035145001
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00231470 evm_27.TU.AmTr_v1... Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus 0.06 OrthoFinder output from all 47 species
AT3G06880 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Ehy_g18045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_38779 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.03 OrthoFinder output from all 47 species
LOC_Os02g07190.1 LOC_Os02g07190 Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.03 OrthoFinder output from all 47 species
LOC_Os05g30010.1 LOC_Os05g30010 Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.03 OrthoFinder output from all 47 species
Solyc01g066740.3.1 Solyc01g066740 Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 1032 1063
IPR001680 WD40_repeat 995 1020
No external refs found!