LOC_Os04g42000.1

Description : lumazine synthase (RibE)

Gene families : OG_01_0004154 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004154_tree ,
OG_02_0004279 (LandPlants) Phylogenetic Tree(s): OG_02_0004279_tree ,
OG_03_0006046 (SeedPlants) Phylogenetic Tree(s): OG_03_0006046_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g42000.1
Cluster	HCCA: Cluster_316

Target	Alias	Description	ECC score	Gene Family Method
Pp3c27_2710V3.1	No alias	6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase...	0.02	Archaeplastida
Smo154058	No alias	Coenzyme metabolism.FMN/FAD biosynthesis.lumazine synthase (RibE)	0.05	Archaeplastida
Zm00001e006713_P001	No alias	lumazine synthase (RibE)	0.03	Archaeplastida
Pp3c27_2710V3.1	No alias	6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase...	0.02	LandPlants
Smo154058	No alias	Coenzyme metabolism.FMN/FAD biosynthesis.lumazine synthase (RibE)	0.05	LandPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006767	water-soluble vitamin metabolic process	None	Extended
BP	GO:0006771	riboflavin metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009110	vitamin biosynthetic process	None	Extended
BP	GO:0009231	riboflavin biosynthetic process	IEA	Interproscan
CC	GO:0009349	riboflavin synthase complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042364	water-soluble vitamin biosynthetic process	None	Extended
BP	GO:0042726	flavin-containing compound metabolic process	None	Extended
BP	GO:0042727	flavin-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002180	LS/RS	78	216

External Links

No external refs found!

LOC_Os04g42000.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation