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  5. GSVIVT01034953001

GSVIVT01034953001


Description : Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana


Gene families : OG0001250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001250_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034953001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00221p00020810 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g16420,... 0.04 OrthoFinder output from all 47 species
AT1G74580 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
MA_131324g0010 No alias Pentatricopeptide repeat-containing protein At5g18475... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 310 342
IPR002885 Pentatricopeptide_repeat 98 156
IPR002885 Pentatricopeptide_repeat 493 522
IPR002885 Pentatricopeptide_repeat 349 398
IPR002885 Pentatricopeptide_repeat 594 641
IPR002885 Pentatricopeptide_repeat 244 292
IPR002885 Pentatricopeptide_repeat 181 228
IPR002885 Pentatricopeptide_repeat 419 467
IPR002885 Pentatricopeptide_repeat 525 573
No external refs found!