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  5. GSVIVT01034887001

GSVIVT01034887001


No description available


Gene families : OG0001680 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001680_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034887001
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Als_g01916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037895 No alias not classified & original description: CDS=597-2531 0.03 OrthoFinder output from all 47 species
Ceric.09G077000.1 Ceric.09G077000 not classified & original description: pacid=50586652... 0.03 OrthoFinder output from all 47 species
MA_9521009g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g26068 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e019113_P001 Zm00001e019113 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e027001_P003 Zm00001e027001 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR007700 DUF668 382 466
IPR021864 DUF3475 161 217
No external refs found!