GSVIVT01034746001 (PDR6, ATPDR6)

Aliases : PDR6, ATPDR6

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01034746001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00225530	PIS1, ABCG37,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00122p00119310	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AT2G37280	ATPDR5, PDR5	pleiotropic drug resistance 5	0.03	OrthoFinder output from all 47 species
AT4G15230	ATPDR2, PDR2	pleiotropic drug resistance 2	0.02	OrthoFinder output from all 47 species
Adi_g035578	ABCG40, PDR12,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g055702	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g38727	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Als_g49455	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g28174	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g16447	ABCG40, PDR12,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g20545	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g63006	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0232.g059286	PEN3, ABCG36,...	subfamily ABCG transporter & original description: CDS=735-5249	0.03	OrthoFinder output from all 47 species
Cba_g10025	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g32414	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.19G065600.1	PDR6, ATPDR6,...	subfamily ABCG transporter & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.1Z322800.1	PDR6, ATPDR6,...	subfamily ABCG transporter & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.38G052500.1	PEN3, ABCG36,...	subfamily ABCG transporter & original description:...	0.04	OrthoFinder output from all 47 species
Cre17.g728400	PEN3, ABCG36,...	Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum	0.01	OrthoFinder output from all 47 species
Dac_g22063	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g33192	ABCG40, PDR12,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g38790	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g49905	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01034748001	PDR11, ATPDR11	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
GSVIVT01036184001	PDR11, ATPDR11	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Gb_04573	PEN3, ABCG36,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Gb_15305	PDR4, ATPDR4	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Gb_37006	ABCG40, PDR12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
LOC_Os01g42350.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os01g42380.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
LOC_Os01g52560.1	PEN3, ABCG36,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os02g32690.1	PIS1, ABCG37,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os09g16330.2	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
MA_10426781g0010	PDR4, ATPDR4	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
MA_10427561g0020	ABCG40, PDR12,...	ABC transporter G family member 31 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
MA_10436632g0010	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
MA_10437197g0020	PDR6, ATPDR6	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
MA_12965g0010	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
MA_135152g0010	PEN3, ABCG36,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
MA_3894g0010	PEN3, ABCG36,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Mp2g07030.1	PDR6, ATPDR6	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Nbi_g34365	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g09231	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013064	ABCG40, PDR12,...	subfamily ABCG transporter & original description: CDS=213-3857	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026014	ATPDR3, PDR3	subfamily ABCG transporter & original description: CDS=1-2877	0.04	OrthoFinder output from all 47 species
Sam_g07220	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo412699	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo412710	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo417263	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Smo441717	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo96758	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Solyc08g067610.3.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Solyc08g067620.2.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Solyc09g091660.3.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
Spa_g06968	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g56833	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e006460_P001	PDR11, ATPDR11,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e020667_P001	ABCG40, PDR12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Zm00001e039353_P001	PIS1, ABCG37,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e040575_P001	PDR6, ATPDR6,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0016759	cellulose synthase activity	IEP	HCCA
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
CC	GO:0030286	dynein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	1168	1380
IPR013525	ABC_2_trans	515	727
IPR003439	ABC_transporter-like_ATP-bd	872	1022
IPR013581	PDR_assoc	740	798
IPR029481	ABC_trans_N	169	220
IPR003439	ABC_transporter-like_ATP-bd	245	427

External Links

No external refs found!

GSVIVT01034746001 (PDR6, ATPDR6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation