GSVIVT01034611001


Description : RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-B component


Gene families : OG0007641 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007641_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034611001
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Ceric.03G034300.1 smB, Ceric.03G034300 component *(Sm-B) of U1/U2/U4/U5-associated Sm accessory... 0.03 OrthoFinder output from all 47 species
Cre14.g611150 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.01 OrthoFinder output from all 47 species
LOC_Os07g07220.1 smB, LOC_Os07g07220 component Sm-B of U1/U2/U4/U5-associated Sm accessory... 0.04 OrthoFinder output from all 47 species
Solyc01g094540.4.1 smB, Solyc01g094540 component Sm-B of U1/U2/U4/U5-associated Sm accessory... 0.03 OrthoFinder output from all 47 species
Solyc05g049950.3.1 smB, Solyc05g049950 component Sm-B of U1/U2/U4/U5-associated Sm accessory... 0.05 OrthoFinder output from all 47 species
Zm00001e011476_P001 Zm00001e011476 component Sm-B of U1/U2/U4/U5-associated Sm accessory... 0.03 OrthoFinder output from all 47 species
Zm00001e032884_P001 Zm00001e032884 component Sm-B of U1/U2/U4/U5-associated Sm accessory... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0017053 transcription repressor complex IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 9 40
No external refs found!