Description : RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-B component
Gene families : OG0007641 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007641_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01034611001 | |
Cluster | HCCA: Cluster_70 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ceric.03G034300.1 | smB, Ceric.03G034300 | component *(Sm-B) of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species | |
Cre14.g611150 | No alias | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os07g07220.1 | smB, LOC_Os07g07220 | component Sm-B of U1/U2/U4/U5-associated Sm accessory... | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g094540.4.1 | smB, Solyc01g094540 | component Sm-B of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g049950.3.1 | smB, Solyc05g049950 | component Sm-B of U1/U2/U4/U5-associated Sm accessory... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e011476_P001 | Zm00001e011476 | component Sm-B of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032884_P001 | Zm00001e032884 | component Sm-B of U1/U2/U4/U5-associated Sm accessory... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
CC | GO:0017053 | transcription repressor complex | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001163 | LSM_dom_euk/arc | 9 | 40 |
No external refs found! |