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  5. GSVIVT01034601001

GSVIVT01034601001


Description : Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUP1/NUP136 nucleoporin


Gene families : OG0002028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034601001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00164270 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
AT3G10650 No alias BEST Arabidopsis thaliana protein match is:... 0.08 OrthoFinder output from all 47 species
Adi_g011582 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Ala_g06113 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.07 OrthoFinder output from all 47 species
Als_g30303 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.02 OrthoFinder output from all 47 species
Als_g31899 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.04 OrthoFinder output from all 47 species
Als_g60762 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0052.g031533 No alias not classified & original description: CDS=475-3180 0.03 OrthoFinder output from all 47 species
Azfi_s2690.g112655 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Cba_g14237 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Ceric.07G044000.1 Ceric.07G044000 not classified & original description: pacid=50627215... 0.09 OrthoFinder output from all 47 species
Ceric.08G016500.1 Ceric.08G016500 not classified & original description: pacid=50638572... 0.04 OrthoFinder output from all 47 species
Ceric.1Z123400.1 Ceric.1Z123400 nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.09 OrthoFinder output from all 47 species
Dac_g06530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05781 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.04 OrthoFinder output from all 47 species
Dcu_g49204 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.04 OrthoFinder output from all 47 species
Ehy_g04036 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g26942 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.05 OrthoFinder output from all 47 species
Gb_18080 No alias NUP1/NUP136 nucleoporin of nuclear pore complex 0.08 OrthoFinder output from all 47 species
Gb_35130 No alias NUP1/NUP136 nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species
Len_g19191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30747 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.04 OrthoFinder output from all 47 species
Lfl_g14234 No alias nuclear lamina CRWN-interacting protein *(KAKU4) &... 0.07 OrthoFinder output from all 47 species
MA_87384g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g05990.1 No alias NUP1/NUP136 nucleoporin of nuclear pore complex 0.05 OrthoFinder output from all 47 species
Msp_g14916 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Msp_g35297 No alias nuclear lamina CRWN-interacting protein *(KAKU4) &... 0.02 OrthoFinder output from all 47 species
Msp_g48013 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03209 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.02 OrthoFinder output from all 47 species
Nbi_g09860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43950 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.05 OrthoFinder output from all 47 species
Ore_g28862 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g10463 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.05 OrthoFinder output from all 47 species
Pir_g66188 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.04 OrthoFinder output from all 47 species
Pnu_g13816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17284 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g13887 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g19954 No alias nuclear lamina CRWN-interacting protein *(KAKU4) &... 0.04 OrthoFinder output from all 47 species
Solyc05g055110.4.1 Solyc05g055110 NUP1/NUP136 nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species
Solyc11g006390.2.1 Solyc11g006390 NUP1/NUP136 nucleoporin of nuclear pore complex 0.06 OrthoFinder output from all 47 species
Spa_g06717 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.05 OrthoFinder output from all 47 species
Tin_g06136 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.05 OrthoFinder output from all 47 species
Tin_g06778 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.02 OrthoFinder output from all 47 species
Zm00001e005928_P001 Zm00001e005928 NUP1/NUP136 nucleoporin of nuclear pore complex 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!