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  5. GSVIVT01034523001

GSVIVT01034523001


Description : RNA biosynthesis.transcriptional activation.Trihelix transcription factor


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034523001
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT1G76890 AT-GT2, GT2 No description available 0.03 OrthoFinder output from all 47 species
Aob_g05344 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g55430 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G059500.1 Ceric.17G059500 Trihelix-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Dcu_g21159 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08613 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27401 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42672 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60919 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!