- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : RBL1, ATRBL1
Description : Protein degradation.peptidase families.serine-type peptidase activities.Rhomboid protease
Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01034160001 | |
| Cluster | HCCA: Cluster_57 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00104p00044730 | RBL1, ATRBL1,... | Protein degradation.peptidase families.serine-type... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G52580 | RBL5, ATRBL5 | RHOMBOID-like protein 5 | 0.05 | OrthoFinder output from all 47 species | |
| AT1G63120 | RBL2, ATRBL2 | RHOMBOID-like 2 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g017308 | RBL1, ATRBL1 | protease *(RBL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g108099 | RBL2, ATRBL2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12857 | RBL1, ATRBL1 | protease *(RBL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g05510 | RBL1, ATRBL1 | protease *(RBL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000254.82 | RBL1, ATRBL1 | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01017301001 | RBL1, ATRBL1 | Protein degradation.peptidase families.serine-type... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_37376 | RBL1, ATRBL1 | protease (RBL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g02530.1 | RBL2, ATRBL2,... | protease (RBL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g43320.1 | RBL2, ATRBL2,... | protease (RBL) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g13142 | RBL1, ATRBL1 | protease *(RBL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g50135 | RBL1, ATRBL1 | protease *(RBL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05981 | RBL1, ATRBL1 | protease *(RBL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g00504 | RBL1, ATRBL1 | protease *(RBL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g00696 | RBL1, ATRBL1 | protease *(RBL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g005580.4.1 | RBL1, ATRBL1,... | protease (RBL) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e002140_P002 | RBL2, ATRBL2,... | protease (RBL) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007219_P001 | RBL2, ATRBL2,... | protease (RBL) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004252 | serine-type endopeptidase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003779 | actin binding | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008131 | primary amine oxidase activity | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008378 | galactosyltransferase activity | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
| MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| MF | GO:0048038 | quinone binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022764 | Peptidase_S54_rhomboid_dom | 57 | 197 |
| No external refs found! |