LOC_Os12g31748 (Os12g0501700)


Aliases : Os12g0501700

Description : 33.99 development.unspecified MADS box gene negatively regulated by APETALA1 AGAMOUS-like 8 (AGL8)


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os12g31748
Cluster HCCA cluster: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
AT4G24540 AGL24 AGAMOUS-like 24 0.02 Gene family
AT5G62165 AGL42 AGAMOUS-like 42 0.03 Gene family
LOC_Os08g41950 Os08g0531700 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Smo113962 PACid_15420129 No description available 0.01 Gene family
Solyc02g065730.2.1 Solyc02g065730.2 33.99 development.unspecified MADS box gene negatively... 0.02 Gene family
Solyc10g017630.2.1 Solyc10g017630.2 No description available 0.02 Gene family
Solyc11g010570.2.1 Solyc11g010570.2 33.99 development.unspecified Encodes a nuclear protein... 0.04 Gene family
Zm00001d018142 GRMZM2G046885 33.99 development.unspecified Encodes a nuclear protein... 0.02 Gene family
Zm00001d039080 GRMZM5G891280 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d045231 GRMZM2G531231 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0046983 protein dimerization activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002487 TF_Kbox 94 175
IPR002100 TF_MADSbox 10 57
No external refs found!