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  5. GSVIVT01034119001

GSVIVT01034119001


No description available


Gene families : OG0000352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034119001
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT5G12460 No alias Protein of unknown function (DUF604) 0.07 OrthoFinder output from all 47 species
Adi_g082009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20843.t1 Aspi01Gene20843 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G053300.1 Ceric.03G053300 not classified & original description: pacid=50572689... 0.03 OrthoFinder output from all 47 species
Dcu_g35557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024903001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01025084001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_04629 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_39622 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g31210.1 LOC_Os02g31210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g16290.1 LOC_Os03g16290 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g16334.1 LOC_Os03g16334 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g30868 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g34254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_12294g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g12371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10687 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g052650.2.1 Solyc07g052650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g011090.3.1 Solyc09g011090 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc11g065390.3.1 Solyc11g065390 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g065400.2.1 Solyc11g065400 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc11g065440.3.1 Solyc11g065440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g065470.2.1 Solyc11g065470 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc11g065480.3.1 Solyc11g065480 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g099730.3.1 Solyc12g099730 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g28723 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006740 DUF604 224 479
No external refs found!